Biblio

Export 157 results:
Author Title [ Type(Desc)] Year
Book Chapter
Pace DF, Enquobahrie A, Yang H, Aylward SR, Niethammer M.  2011.  Deformable image registration of sliding organs using anisotropic diffusive regularization. 2011 IEEE International Symposium on Biomedical Imaging From Nano to Macro. :407–413.PDF icon pace2011_isbi_sliding_registration.pdf (1.88 MB)
Conference Paper
Ha J, Alvino C, Pryor G, Niethammer M, Johnson E, Tannenbaum A.  2004.  Active Contours and Optical Flow for Automatic Tracking of Flying Vehicles. Proceedings of the American Control Conference. 4:3441–3446.
Niethammer M, Stein AN, Kalies WD, Pilarczyk P, Mischaikow K, Tannenbaum A.  2002.  Analysis of blood vessel topology by cubical homology. Proceedings of the International Conference on Image Processing. 2:969–972.PDF icon niethammer2002_ICIP_cubical_homology.pdf (93.82 KB)
Niethammer M, Borland D, Marron JS, Woolsey J, Thomas NE.  2010.  Appearance Normalization of Histology Slides. MICCAI, International Workshop Machine Learning in Medical Imaging. PDF icon niethammer2010_color_correction.pdf (1.56 MB)
Li W, Ibanez L, Gelas A, Yeo BTT, Niethammer M, Andreasen NC, Magnotta VA.  2011.  An automated pipeline for cortical surface generation and registration of the cerebral cortex. Proceedings of SPIE. 7962:796229.
Shan L, Charles C, Niethammer M.  2011.  Automatic Atlas-based Three-label Cartilage Segmentation from MR Knee Images. Proceedings of the Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA). PDF icon shan_MMBIA2012.pdf (2.57 MB)
Shan L, Zach C, Styner M, Charles C, Niethammer M.  2010.  Automatic Bone Segmentation and Alignment from MR knee images. SPIE Medical Imaging. PDF icon shan2010_SPIE.pdf (1.25 MB)
Lee J, Ehlers C, Crews F, Niethammer M, Budin F, Paniagua B, Sulik K, Johns J, Styner M, Oguz I.  2011.  Automatic cortical thickness analysis on rodent brain. Proceedings of SPIE. 7962:796248.
Shan L, Charles C, Niethammer M.  2012.  Automatic Multi-Atlas-Based Cartilage Segmentation from Knee MR Images. Proceedings of the International Symposium on Biomedical Imaging (ISBI). PDF icon shan_isbi_2012.pdf (3.64 MB)
Shan L, Zach C, Niethammer M.  2010.  Automatic three-label bone segmentation from knee MR images. International Symposium on Biomedical Imaging (ISBI). PDF icon shan2010_isbi.pdf (1.16 MB)
Vela PA, Niethammer M, Malcolm J, Tannenbaum A.  2005.  Closed Loop Visual Tracking Using Observer-Based Dynamic Active Contours. Proceedings of the Conference on Guidance Navigation and Control. PDF icon vela_acc.pdf (162.6 KB)
Pichon E, Niethammer M, Sapiro G.  2003.  Color histogram equalization through mesh deformation. Proceedings of the International Conference on Image Processing. :117–120.PDF icon pichon2003_ICIP_color_histogram_equalization_through_mesh_deformation.pdf (1.27 MB)
Stanely N., Kwitt R, Niethammer M., Mucha P..  2017.  Compressing Networks with Super Nodes. arXiv.
Hofer C., Kwitt R, Niethammer M., Hoeller Y., Trinka E., Uhl A..  2017.  Constructing Shape Spaces from a Topological Perspective. Proceedings of the International Conference on Information Processing in Medical Imaging (IPMI). PDF icon hofer2017_ipmi.pdf (492.78 KB)
Zach C, Niethammer M, Frahm J-M.  2009.  Continuous Maximal Flows and Wulff Shapes: Application to MRFs. Proceedings of the Conference on Computer Vision and Pattern Recognition (CVPR). :1911–1918.PDF icon zach_cvpr2009a-preprint.pdf (1.46 MB)
Oguz I, Niethammer M, Cates J, Whitaker R, Fletcher T, Styner M.  2009.  Cortical Correspondence with Probabilistic Fiber Connectivity. Proceedings of the Conference on Information Processing in Medical Imaging (IPMI). :651–663.PDF icon oguz2009_ipmi.pdf (4.89 MB)
Hofer C., Kwitt R, Niethammer M., Uhl A..  2017.  Deep Learning with Topological Signatures. arXiv.
Hong Y, Gao Y, Niethammer M, Bouix S.  2014.  Depth-Based Shape Analysis. Proceedings of the International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI). PDF icon hong2014_miccai_depth_based_shape_analysis.pdf (1.08 MB)
Rathi Y, Niethammer M, Laun F, Setsompop K, Michailovich O, Grant PE, Westin C-F.  2013.  Diffusion Propagator Estimation using Radial Basis Functions. Proceedings of the MICCAI Workshop on Computational Diffusion MRI (CDMRI). PDF icon rathi2013_miccai_cdmri_rbf_prop.pdf (3.89 MB)
Niethammer M, Estepar S JR, Bouix S, Shenton M, Westin C-F.  2006.  On Diffusion Tensor Estimation. Proceedings of the International Engineering in Medicine and Biology Conference (EMBC). :2622–2625.PDF icon niethammer2006_EMBS_on_diffusion_tensor_estimation.pdf (455.91 KB)
Huang C, Shan L, Charles C, Niethammer M, Zhu H.  2013.  Diseased Region Detection of Longitudinal Knee MRI Data. Proceedings of the Conference on Information Processing in Medical Imaging (IPMI). 7917:632–643.
Niethammer M, Boucharin A, Zach C, Maltbie E, Shi Y, Styner M.  2010.  DTI Connectivity by Segmentation. MICCAI, International Workshop on Medical Imaging and Augmented Reality (MIAR). PDF icon niethammer2010_miar.pdf (972.77 KB)
Hart G, Shi Y, Zhu H, Sanchez M, Styner M, Niethammer M.  2010.  DTI Longitudinal Atlas Construction as an Average of Growth Models. MICCAI, International Workshop on Spatio-Temporal Image Analysis for Longitudinal and Time-Series Image Data. PDF icon hart2010_longitudinal.pdf (2.09 MB)
Niethammer M, Tannenbaum A.  2004.  Dynamic Geodesic Snakes for Visual Tracking. Proceedings of the Conference on Computer Vision and Pattern Recognition.. 1:660–667.PDF icon niethammer2004_CVPR_dynamic_geodesic_snakes_for_visual_tracking.pdf (551.89 KB)
Niethammer M, Tannenbaum A.  2003.  Dynamic level sets for visual tracking. Proceedings of the Conference on Decision and Control. 5:4883–4888.PDF icon niethammer2003_CDC_dynamic_level_sets_for_visual_tracking.pdf (475.01 KB)

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