Here are some ideas for optimizing Rosetta, with links to new pages for the ones that we actually experiment on, or carry out. RotamerTrie store rotamer sets in a ...

This is a place to jot down project ideas, and link to WikiWords for projects where the ideas are more fleshed out. OptimizingRosetta for ideas specifically pertaining ...

This question is partially addressed in RotamerTrie Main.JackSnoeyink 02 Apr 2005 Rotamer Energy Calculation Main.AndrewLeaverFay 21 Feb 2005 Problem: minimize ...

A topic under OptimizingRosetta TOC We should try to submit to WABI, April 20. This will take some work... The basic idea is described in Hellinga's paper, so we need ...

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