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BioGeometry.HbondPapers
r1.1 - 21 Jul 2009 - 18:56 - Main.guest
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%TOC% ---++ Misc papers on hydrogen bonds Ask me for any papers that aren't already linked/attached. Link back to: RosettaHydrogenBonds ---+++ Survey ---++++ E. N. BAKER and R. E. HUBBARD HYDROGEN BONDING IN GLOBULAR PROTEINS Prog Biophys. molec. Biol., Vol. 44, pp. 97 179, 1984 0079 6107/84 $0.00+.50 Classic survey - easy to read. ---+++ Identifying H bonds ---++++ Revealing Non-Covalent Interactions Erin R. Johnson, Paula Mori-Sanchez, Shahar Keinan Aron J. Cohen, and Weitao Yang Paper draft from Duke suggests that finding minima in density and the gradient of density is a way to reveal non-covalent interactions. ---+++ Statistical Atlases ---++++ Ian McDonald and Janet M Thornton Atlas of Side-Chain and Main-Chain Hydrogen Bonding WWW Edition December 1994, original edition April 1993 http://prowl.rockefeller.edu/aainfo/hbonds.html ---+++ Computations ---++++ MM4 calculation Charles H. Langley and Norman L. Allinger Molecular Mechanics (MM4) and ab Initio Study of Amide-Amide and Amide-Water Dimers J. Phys. Chem. A 2003, 107, 5208-5216 Actually gives complete function description. Uses full angles and lone pairs. -- Main.JackSnoeyink - 21 Jul 2009
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